PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC026270.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 125aa    MW: 14643 Da    PI: 9.5832
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC026270.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.98.5e-191710641128
           NAM  41 kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   k  P +L   + ++ +++ fF++++ k    t   +nr+t+ gyWk t k+++  s  kg+++ +kk+Lv+++gr+pkg +td vmhey+l
  EcC026270.30  17 KQYPFQLS-YIPSDGRKCLFFCPHEDKILpdTLGSNNRMTDLGYWKDTCKKRTKRSPaKGKQIEIKKILVYHEGRQPKGCNTDVVMHEYHL 106
                   55688886.6778899********999874456699**************99998887999*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.7611125IPR003441NAC domain
PfamPF023653.2E-98106IPR003441NAC domain
SuperFamilySSF1019419.68E-1519109IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
CYFCWVLYLK SQAKQSKQYP FQLSYIPSDG RKCLFFCPHE DKILPDTLGS NNRMTDLGYW  60
KDTCKKRTKR SPAKGKQIEI KKILVYHEGR QPKGCNTDVV MHEYHLNSKV FDSKISGPLI  120
DIFLF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041186.12e-42PREDICTED: protein NTM1-like 9
TrEMBLA0A058ZRY52e-39A0A058ZRY5_EUCGR; Uncharacterized protein
TrEMBLA0A058ZS054e-40A0A058ZS05_EUCGR; Uncharacterized protein
STRINGXP_010041186.17e-42(Eucalyptus grandis)
STRINGXP_010041187.12e-42(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.14e-17NAC 014