PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC026270.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 157aa    MW: 18100.9 Da    PI: 8.4761
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC026270.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.31.3e-3551382128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                   p+G+rF+Pt++elv+++L+ k++gk   +   i+e+ iy++eP dL        ++ ++ +e++fF++   k ++++r+n  +t+ gyWk t k++ 
  EcC026270.50   5 PVGLRFEPTEDELVDHHLRGKLKGKLEAF-CLIPELYIYSCEPPDLFIsynelsAIPSDGRECFFFCPCGDKIPNNRRSNNrMTELGYWKDTCKKRI 100
                   89*********************998555.78**************633555655666899*************98776544************999 PP

           NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   + s  +g+++g++k+Lv+y+gr+pkg+ktd vmhey+l
  EcC026270.50 101 IRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYHL 138
                   98878999*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.42E-343143IPR003441NAC domain
PROSITE profilePS5100534.1084157IPR003441NAC domain
PfamPF023653.5E-205138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MATWPVGLRF EPTEDELVDH HLRGKLKGKL EAFCLIPELY IYSCEPPDLF ISYNELSAIP  60
SDGRECFFFC PCGDKIPNNR RSNNRMTELG YWKDTCKKRI IRSLVTGKQI GIRKILVYYE  120
GRQPKGRKTD VVMHEYHLNS SVSDSKISGP VLHFSLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-23513816140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041186.11e-109PREDICTED: protein NTM1-like 9
TrEMBLA0A058ZRY51e-105A0A058ZRY5_EUCGR; Uncharacterized protein
STRINGXP_010041186.11e-108(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.34e-34NAC transcription factor-like 9