PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC030044.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 386aa MW: 42134.1 Da PI: 7.5322

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC030044.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.4	2.4e-16	181	234	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e++r+rr+q+NRe+ArrsR+RK++ + eLe v +L+ e + L k+l +++++ EcC030044.10 181 EVRRARRMQSNRESARRSRRRKQEHMSELESQVGQLKVEHTGLLKRLTDMNQKY 234 789****************************************96666665554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-11	178	234	No hit	No description
SMART	SM00338	1.9E-17	179	243	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.105	181	235	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-14	181	234	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.27E-11	182	234	No hit	No description
PROSITE pattern	PS00036	0	186	201	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	1.9E-24	250	361	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MVTLYYSNHY AGYHSDDTEL IAHSFKSNTR VVIIRPNGQL AQLNQPQPPP PQLQPQPQPK 60 VPVNPDDSHA FLKSRLEMAC AAVARFNEGT MKPGESIGYP KMPLRASIST QSDFQADGSG 120 HGVPIPQGAD SGSLGISALP TIQRDSGVHV KQTTSESSRE DSDDEEFEGD TGTTENKDPA 180 EVRRARRMQS NRESARRSRR RKQEHMSELE SQVGQLKVEH TGLLKRLTDM NQKYDVASVD 240 NRILKADIET LRAKVKMAEE TVKRVTGINP LVIAMSNLPS SDIPFGSSPM DSFTTAATPM 300 QPNADHFFHH AAPNITSINP HHPRFDSSGF PRNNPLPVLT NIQADAISNN VAPVSSMQGV 360 PGAPGAIPGW SSNIPPPLAN TNIKHK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MVTLYYSNHY AGYHSDDTEL IAHSFKSNTR VVIIRPNGQL AQLNQPQPPP PQLQPQPQPK  60
VPVNPDDSHA FLKSRLEMAC AAVARFNEGT MKPGESIGYP KMPLRASIST QSDFQADGSG  120
HGVPIPQGAD SGSLGISALP TIQRDSGVHV KQTTSESSRE DSDDEEFEGD TGTTENKDPA  180
EVRRARRMQS NRESARRSRR RKQEHMSELE SQVGQLKVEH TGLLKRLTDM NQKYDVASVD  240
NRILKADIET LRAKVKMAEE TVKRVTGINP LVIAMSNLPS SDIPFGSSPM DSFTTAATPM  300
QPNADHFFHH AAPNITSINP HHPRFDSSGF PRNNPLPVLT NIQADAISNN VAPVSSMQGV  360
PGAPGAIPGW SSNIPPPLAN TNIKHK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	195	202	RRSRRRKQ
2	197	202	SRRRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010038789.1	0.0	PREDICTED: light-inducible protein CPRF2 isoform X1
TrEMBL	A0A059D232	0.0	A0A059D232_EUCGR; Uncharacterized protein
STRING	XP_010038789.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	1e-44	basic leucine zipper 25