PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC030991.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 250aa    MW: 28429.3 Da    PI: 9.6847
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC030991.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.21.7e-2887144258
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                   +Dgy+WrK GqK+ k+++ pr+YYrC++a gCpvkkkv+rsaed ++++ tYeg Hnh
  EcC030991.60  87 RDGYQWRKHGQKVTKDNPSPRAYYRCSMApGCPVKKKVQRSAEDRTLLVATYEGLHNH 144
                   7***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.3E-2876145IPR003657WRKY domain
PROSITE profilePS5081125.37381147IPR003657WRKY domain
SuperFamilySSF1182901.28E-2483145IPR003657WRKY domain
SMARTSM007741.2E-3086146IPR003657WRKY domain
PfamPF031064.5E-2388144IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015074Biological ProcessDNA integration
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016746Molecular Functiontransferase activity, transferring acyl groups
GO:0030145Molecular Functionmanganese ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0045735Molecular Functionnutrient reservoir activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MSSNTFGQEK IFRDELERLR KENETLKVMV EVIGSKSSIL ETHLRESHCP PYHHDSNKRA  60
RIEEFPFTKS SKIFVKVDEE DKSLVVRDGY QWRKHGQKVT KDNPSPRAYY RCSMAPGCPV  120
KKKVQRSAED RTLLVATYEG LHNHGTVDVP NSDHLPLRSD HSPRGQPVNR DLTLMPMMSP  180
SSIQPPITLD LSLSRSSLPQ DPKPSYLSKN LRFGNRSSNC AKIEEYAASL VRDPKFTEAL  240
ALTVARTLNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21851441371WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063931.11e-172PREDICTED: WRKY transcription factor WRKY76 isoform X1
TrEMBLA0A059BYA61e-171A0A059BYA6_EUCGR; Uncharacterized protein
TrEMBLA0A059CS301e-171A0A059CS30_EUCGR; Uncharacterized protein
STRINGXP_010063931.11e-171(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.11e-39WRKY DNA-binding protein 18