PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC031468.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 168aa    MW: 17750.6 Da    PI: 4.4097
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC031468.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.000733859223
                  EETTTTEEESSHHHHHHHHHHT CS
       zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                  +Cp C+  F+++   + H r H
  EcC031468.10 38 PCPSCDAKFPTWPAVHGHRRIH 59
                  7*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002803759IPR007087Zinc finger, C2H2
PROSITE profilePS501578.9743764IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MSGAEDGESG VNQAEELPFA GGSSTAGVVD NAPSGLCPCP SCDAKFPTWP AVHGHRRIHG  60
KEKEAASILL GLGDEFASPH AMLVYNSMSE QEKEVVSVLP EIKLKKSNET EGSEMKGDDG  120
RIVADGSTSP SAVDARRKKI QLELDLNEKP PEDDKNDDKD YGGGNGVL