PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC031961.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 210aa    MW: 23180.8 Da    PI: 5.8545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC031961.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-194897255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   y+GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a+++a++kl+g
  EcC031961.40 48 TYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSLEAALAYDKAARKLHG 97
                  69****999.**********8...3.35**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.67E-3047107No hitNo description
SuperFamilySSF541713.33E-2148106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-3048106IPR001471AP2/ERF domain
PfamPF008471.8E-134897IPR001471AP2/ERF domain
PROSITE profilePS5103221.82548105IPR001471AP2/ERF domain
SMARTSM003801.3E-3348111IPR001471AP2/ERF domain
PRINTSPR003671.1E-94960IPR001471AP2/ERF domain
PRINTSPR003671.1E-97187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0072488Biological Processammonium transmembrane transport
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008519Molecular Functionammonium transmembrane transporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MQTMDQLHQA QVLAGKKKEA VKTKKPSMGR SRKGCMRGKG GPENALCTYR GVRQRTWGKW  60
VAEIREPNRG ARLWLGTFNT SLEAALAYDK AARKLHGSSA RLNLPATMTT VTTPIDSNDN  120
SSNFSLAGSS NSCICEQAAK SEAVDVNSRD PFIMRDDTSN DTTGDANYNY VDWSGEDLVV  180
PDMVNEDQGD YKCWPEFSFG SDYLEMSDLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-1949105360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010043317.11e-154PREDICTED: ethylene-responsive transcription factor ERF071
TrEMBLA0A1J0MRG71e-128A0A1J0MRG7_EUCGU; Dehydration-responsive element-binding protein 2-02
STRINGXP_010043317.11e-153(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.15e-44ERF family protein