PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC032073.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 308aa    MW: 34071.9 Da    PI: 5.0537
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC032073.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.6e-31114170258
                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                   dDgy+WrKYGqK++k+s +prsYY+Ct ++C++kk+vers +dp+++++tYeg H h
  EcC032073.60 114 DDGYKWRKYGQKSIKNSANPRSYYKCTNPRCNAKKQVERSGDDPDTLIVTYEGLHLH 170
                   8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081126.119108173IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-28110170IPR003657WRKY domain
SuperFamilySSF1182902.88E-26111170IPR003657WRKY domain
SMARTSM007745.1E-35113172IPR003657WRKY domain
PfamPF031063.2E-25114170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0046274Biological Processlignin catabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0048046Cellular Componentapoplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005507Molecular Functioncopper ion binding
GO:0016787Molecular Functionhydrolase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0052716Molecular Functionhydroquinone:oxygen oxidoreductase activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
LEVMMEEDNG FGDEEELVRE LLNNESPLFM TMDPSTESSN QEAAIKRLMS NVYSGPTIQD  60
IESALFLSAH PMDIQPPQDY SPARPQTSSF QRGLDKIDHK YTLKIKSCGN GTTDDGYKWR  120
KYGQKSIKNS ANPRSYYKCT NPRCNAKKQV ERSGDDPDTL IVTYEGLHLH FAYPYFPLGP  180
VHQLDPPVKK PKKAALSTDD QAQDKPNEVL EAEGSTDAFT TGLAQTAMED CHLGQTQEAM  240
GHQGLGLLED VVPFMIRNPT MKNVSDHSSS SSSSSYNHLS PPNSPSYQSC SPSYAPPYYG  300
IGLGSCIK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-191141701874Probable WRKY transcription factor 4
2lex_A2e-191141701874Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037823.10.0PREDICTED: probable WRKY transcription factor 49
TrEMBLA0A059A8A00.0A0A059A8A0_EUCGR; Uncharacterized protein
STRINGXP_010037823.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-46WRKY DNA-binding protein 49