PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC032841.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 220aa    MW: 22826.7 Da    PI: 10.0189
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC032841.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013197219223
                   EETTTTEEESSHHHHHHHHHH.T CS
       zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                   +C++Cg+ F+ ++  + H  + H
  EcC032841.20 197 TCHKCGEQFTKWDAAEAHHLSkH 219
                   7*****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.58196220IPR007087Zinc finger, C2H2
PROSITE patternPS000280198219IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007018Biological Processmicrotubule-based movement
GO:0003777Molecular Functionmicrotubule motor activity
GO:0005524Molecular FunctionATP binding
GO:0008017Molecular Functionmicrotubule binding
GO:0046872Molecular Functionmetal ion binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MPTVWFALKK SLHCKSEPSD VHDPKTRKQL TTILTKKPGR SGCSRSIANL KDVIHGSKRH  60
MAEKPPSCSP RSIGSSEFLN PLTHEVILSN TKCELKITGY GNGFQDSGAG GGVGGEGGGG  120
GGGSTFVGTL TPGTPMHYFN PSFRTTSANG ATPRKGGSVL GEREGSGGLG GRVGGGGVRS  180
SSRVSLDVDA NGISIITCHK CGEQFTKWDA AEAHHLSKHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169176GGRVGGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062955.11e-120PREDICTED: uncharacterized protein LOC104450201
TrEMBLA0A059BVG61e-119A0A059BVG6_EUCGR; Uncharacterized protein
STRINGXP_010062955.11e-120(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.18e-49C2H2 family protein