PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC033075.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 221aa    MW: 24545.2 Da    PI: 6.1621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC033075.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.6e-123431255
           AP2 12 rgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +grW+A+I  +     +k+ +lg++ t eeAa+a++ a+ +++g
  EcC033075.10  3 NGRWEARIGRVLG---NKYLYLGTYSTQEEAARAYDIAAIEYRG 43
                  7******988422...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.09E-22153No hitNo description
PROSITE profilePS5103215.396151IPR001471AP2/ERF domain
SMARTSM003803.4E-21157IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-14153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.8E-15252IPR001471AP2/ERF domain
PfamPF008479.5E-8343IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006412Biological Processtranslation
GO:0005840Cellular Componentribosome
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
HHNGRWEARI GRVLGNKYLY LGTYSTQEEA ARAYDIAAIE YRGINAVTNF DLSSYIRWLK  60
RGPNNSHAPQ KPQLTLHSEP ASTSSNHIQG EEESKPSIFF RSNSFVFDDL TAPMKQEAST  120
HAVCVSTNST SPTALGLLLK SSVFRELVEK NPHSLDEEKE DPTKGFMQAG RGDNIRGGFG  180
NEIGGSPFIF TPIGESESLP GLESRESTML VGNRTEPWNW Q
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046657.21e-160PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700
TrEMBLA0A059D8R31e-113A0A059D8R3_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010046657.11e-159(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.21e-24ERF family protein