PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC033159.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family CPP
Protein Properties Length: 125aa    MW: 14098.1 Da    PI: 8.4361
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC033159.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR42.61.2e-131249340
           TCR  3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
                  +k+C+C++skCl+++CeCf a+ +C+++C C  C N++
  EcC033159.30 12 TKRCSCRRSKCLQLFCECFVAELFCTDSCACRLCYNNR 49
                  799*********************************97 PP
2TCR30.95.4e-10104125122
           TCR   1 kekkgCnCkkskClkkYCeCfa 22 
                   ++k+gCnCkks+Clk+YCeC++
  EcC033159.30 104 RHKRGCNCKKSQCLKNYCECYQ 125
                   589******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.5E-81051IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163425.70611125IPR005172CRC domain
PfamPF036382.4E-101348IPR005172CRC domain
SMARTSM011140.069104125IPR033467Tesmin/TSO1-like CXC domain
PfamPF036383.1E-6106125IPR005172CRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
KKAENATENG STKRCSCRRS KCLQLFCECF VAELFCTDSC ACRLCYNNRD MEDSVYKAKE  60
LIKLHNPLAF GPKVVQHPTD SPPDKAESGG RVGGRSEDTP SFVRHKRGCN CKKSQCLKNY  120
CECYQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018717839.11e-74PREDICTED: protein tesmin/TSO1-like CXC 2
TrEMBLA0A1U7ZN451e-35A0A1U7ZN45_NELNU; uncharacterized protein LOC104592360 isoform X1
TrEMBLA0A1U7ZPH61e-35A0A1U7ZPH6_NELNU; uncharacterized protein LOC104592360 isoform X2
STRINGXP_010030274.11e-73(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.13e-33Tesmin/TSO1-like CXC domain-containing protein