PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC033843.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 169aa    MW: 19038.4 Da    PI: 6.2326
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC033843.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-081222446
                     HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                     W++Ia++++ gRt++++k++w++
     EcC033843.20  1 WAAIAARLP-GRTDNEIKNYWNT 22
                     *********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001672.09E-6124No hitNo description
PROSITE profilePS5129415.939128IPR017930Myb domain
PfamPF002491.8E-6122IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-11125IPR009057Homeodomain-like
SuperFamilySSF466893.18E-6129IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
WAAIAARLPG RTDNEIKNYW NTRLKKRVNN RIKLRVPTAC DIKVKPDRNK SSSHPHASHP  60
TIDTPKLEPG IGSQTEIPTV SANSFCTSYG VHRDDKTLEN SWYPPCSVIE EEESLWEQFP  120
ALRDLEIVEN FGGMDMHLGA TAPALVCMQQ EQVYHSGSCA DFIMDLWGN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051860.11e-124PREDICTED: transcription factor MYB82-like
TrEMBLA0A059CCL11e-91A0A059CCL1_EUCGR; Uncharacterized protein
STRINGXP_010051860.11e-123(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.12e-12myb domain protein 84