PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC034214.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 55aa    MW: 6396.45 Da    PI: 10.2359
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC034214.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.4e-071947129
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                     +g+W+++Ed +lv +v ++G  +W+  a+
     EcC034214.10 19 KGAWSAQEDRKLVAYVMRYGIWNWTHMAE 47
                     79******************999988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-91347IPR009057Homeodomain-like
PROSITE profilePS512949.4391455IPR017930Myb domain
SuperFamilySSF466895.94E-81447IPR009057Homeodomain-like
CDDcd001670.001132147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 55 aa     Download sequence    Send to blast
MARYPRVDKI SNGKKTVKKG AWSAQEDRKL VAYVMRYGIW NWTHMAEPAG ECVMH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030549.16e-27PREDICTED: transcription factor MYB23
TrEMBLA0A059AM791e-25A0A059AM79_EUCGR; Uncharacterized protein
STRINGXP_010030549.12e-26(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.19e-09MYB-like 102