PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC034683.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 192aa    MW: 20993.5 Da    PI: 10.0312
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC034683.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10122156539
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                   k  rr+++NReAAr+sR+RKka++++Le+   +L 
  EcC034683.30 122 KTLRRLAQNREAARKSRLRKKAYVQQLETSRMKLN 156
                   7789************************8554443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-9117167No hitNo description
SMARTSM003382.4E-7118185IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.048120164IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-8122166No hitNo description
PfamPF001701.0E-8122157IPR004827Basic-leucine zipper domain
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
SIRSKENNGA YDLGELDQAL FLYLDGGQET PKNTGMMRPP TLNIFPSQPM HEEPSARVNT  60
GMVSPSTNVP RRQLEHSMEL GDPNNDSSTG PEPAKPIKRE GNRKGSTLGS SELEGPKTPD  120
PKTLRRLAQN REAARKSRLR KKAYVQQLET SRMKLNELEQ EIQRARSQGM FLGGAAVGGD  180
QGLHVGGSNI SS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038900.11e-128PREDICTED: transcription factor TGA2.2
SwissprotQ52MZ26e-74TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A059A1T81e-126A0A059A1T8_EUCGR; Uncharacterized protein
STRINGXP_010038900.11e-127(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-57bZIP family protein