PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC034730.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 149aa    MW: 17466.9 Da    PI: 5.9403
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC034730.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.31.5e-3291262128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                   p+G+rF+Pt+eelv++yL+kk++g+  ++ + i+e+ iy++eP dL   ++ + +e++fF++r +        +r+t++g+Wk+t k++ + +  +g
  EcC034730.10   9 PVGLRFKPTEEELVHHYLTKKLRGELETI-SLIPELYIYNWEPLDLF-ILYDDGRECFFFCPRGR--------ERKTEHGFWKETSKKRVIQALdTG 95 
                   89**********************99777.88**************6.6778899*******987........47899*********9999876688 PP

           NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   + +g+k++Lv+y+gr+p+g+ktd  mhey l
  EcC034730.10  96 KPIGTKRILVYYEGRQPHGHKTDVAMHEYLL 126
                   99***************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.5E-356132IPR003441NAC domain
PROSITE profilePS5100532.6328146IPR003441NAC domain
PfamPF023654.8E-219125IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MAESTEAWPV GLRFKPTEEE LVHHYLTKKL RGELETISLI PELYIYNWEP LDLFILYDDG  60
RECFFFCPRG RERKTEHGFW KETSKKRVIQ ALDTGKPIGT KRILVYYEGR QPHGHKTDVA  120
MHEYLLNLNV SDGEISDLVL DFSSFAFPN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-2221269140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065774.23e-92PREDICTED: protein NTM1-like 9 isoform X2
TrEMBLA0A059BCQ75e-69A0A059BCQ7_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010065774.12e-92(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-32NAC transcription factor-like 9