PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC035780.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 90aa    MW: 10871.7 Da    PI: 7.4365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC035780.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.11.7e-191689171
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatg 71
                  lppGfrFh tdeel+ +yLk+k+ g++  +  ++i+e+di+++ePw+Lp+  ++  ++ke++ +++ ++ky+++
  EcC035780.10 16 LPPGFRFHATDEELLIHYLKPKILGRPgERYYDMIPEIDICEFEPWQLPAmfCHWFNSKELFLYCRVKRKYSNS 89
                  79*************************6566788***************5343334889************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-22988IPR003441NAC domain
PROSITE profilePS5100522.3151690IPR003441NAC domain
PfamPF023654.6E-81781IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
LVIQMENTIS EAMRTLPPGF RFHATDEELL IHYLKPKILG RPGERYYDMI PEIDICEFEP  60
WQLPAMFCHW FNSKELFLYC RVKRKYSNSK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018719541.12e-50PREDICTED: protein NTM1-like 9
TrEMBLA0A059DC674e-54A0A059DC67_EUCGR; Uncharacterized protein
STRINGXP_010065386.11e-48(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79671340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-19NAC transcription factor-like 9