PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC035890.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 198aa    MW: 22544.1 Da    PI: 4.1549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC035890.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19151197150
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                   ++ykGVr+++ +g+++AeIrdp++ng  +r++lg++ t+e+Aa a+++a+
  EcC035890.50 151 THYKGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETPEDAALAYDRAA 197
                   68********.***********9998..********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.5E-13151197IPR001471AP2/ERF domain
CDDcd000183.99E-25151198No hitNo description
SuperFamilySSF541714.51E-18152198IPR016177DNA-binding domain
PROSITE profilePS5103220.758152198IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-24152198IPR001471AP2/ERF domain
SMARTSM003801.4E-19152198IPR001471AP2/ERF domain
PRINTSPR003678.2E-10153164IPR001471AP2/ERF domain
PRINTSPR003678.2E-10176192IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0046777Biological Processprotein autophosphorylation
GO:0046854Biological Processphosphatidylinositol phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004430Molecular Function1-phosphatidylinositol 4-kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MLQEIFSPFE TDQFDALKSI CEHLFVGEDD SVDATSYAPT PANMYSWSSS FNNLLLMESW  60
SELPLKVDNS EDMLAYSTMC NELNSGWTMP SASNQELDFE VTTIDYNNIG LASNQELDFK  120
VTTVNYNSSD LVKEKKLEMV DQEAQVLVEK THYKGVRRRP WGKYAAEIRD PKKNGARIWL  180
GTYETPEDAA LAYDRAAF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-26152198248ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732614.11e-141PREDICTED: ethylene-responsive transcription factor 13-like
TrEMBLA0A059BAV27e-97A0A059BAV2_EUCGR; Uncharacterized protein
STRINGXP_010068073.11e-110(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-40ethylene-responsive element binding factor 13