PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC036660.110
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 283aa    MW: 30896.3 Da    PI: 6.5804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC036660.110genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-1850100155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  EcC036660.110  50 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALHIKG 100
                    68*****998.**********843...6**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-1250100IPR001471AP2/ERF domain
PROSITE profilePS5103223.18251108IPR001471AP2/ERF domain
SMARTSM003801.8E-3651114IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-3251109IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2251109IPR016177DNA-binding domain
PRINTSPR003673.2E-105263IPR001471AP2/ERF domain
CDDcd000184.60E-3052110No hitNo description
PRINTSPR003673.2E-107490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MAERSNSSDP ETSPSSSSSS SSSSPDPRRR AGSPAAARDP SRSSKRSKHP VYRGVRMRNW  60
GKWVSEIREP RKKSRIWLGT FPTPEMAARA HDVAALHIKG SSAFLNFPHL AASLPRPSSL  120
SPRDVQAAAS LAAHMPDHQA RCLFRVTLDH VDFTTLSVCP RNLTRKHELT GTVETLRPTA  180
ELDSQHSSLP SRSLSSMVSA MDISATVELS EIVELPSLGA SCDELGGSEF AFVDSVGAEW  240
GYCYHDDYQP AWPEYLQDCG PYDCGHQPAA LPESGGSLLW DYD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-17471091073Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010049108.11e-153PREDICTED: ethylene-responsive transcription factor TINY
TrEMBLA0A059CTS31e-151A0A059CTS3_EUCGR; Uncharacterized protein
STRINGXP_010049108.11e-152(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-40ERF family protein