PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC036920.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 122aa MW: 13632.7 Da PI: 10.6528

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC036920.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.1	1.9e-28	68	117	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH+rF ave+LGG+++AtPk +l++m++kgLt++hvkSHLQ EcC036920.10 68 PRLRWTPELHQRFTLAVERLGGEDRATPKMVLQIMGMKGLTISHVKSHLQ 117 9************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	9.95	64	122	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	4.2E-27	64	117	IPR009057	Homeodomain-like
SuperFamily	SSF46689	5.2E-14	65	118	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.5E-22	68	118	IPR006447	Myb domain, plants
Pfam	PF00249	8.6E-8	69	118	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MVHGEESFLK RSDSPSSSVV IVDGPSSESS DLRGNRMRDH GTLALLPLGT INQQQLSPVR 60 PYVRSKTPRL RWTPELHQRF TLAVERLGGE DRATPKMVLQ IMGMKGLTIS HVKSHLQVCL 120 FT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	5e-18	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-18	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-18	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-18	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-18	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018728306.1	1e-45	PREDICTED: uncharacterized protein LOC108959263 isoform X2
Swissprot	Q700D9	2e-24	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A059CF66	1e-33	A0A059CF66_EUCGR; Uncharacterized protein
STRING	BRADI4G26800.1	4e-29	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM363	28	184

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-28	G2-like family protein