PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC037331.40

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 304aa MW: 33370.4 Da PI: 9.283

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC037331.40	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47	5.7e-15	260	303	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k+ EcC037331.40 260 RRQKRMIKNRESAARSRARKQAYTSELENKVSRLEEENERLRKR 303 79****************************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.0E-14	253	303	No hit	No description
SMART	SM00338	1.2E-4	256	303	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.783	258	304	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-12	260	303	IPR004827	Basic-leucine zipper domain
CDD	cd14707	8.43E-22	260	302	No hit	No description
SuperFamily	SSF57959	4.94E-10	260	303	No hit	No description
PROSITE pattern	PS00036	0	263	278	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MGIQTMASQG GGGGSNAGGG GGNNGKSTEV QPLTRQNSIY SLTLDEVQNQ LGDLGKPLSS 60 MNLDELLKNV WTAEAGQSMF MDVEGTAVGN QNALPRQGSV SLTGALSKKT VDEVWRDIQQ 120 NKNREENKSK ERQPTLGEMT LEDFLVKAGV VVESSSDKRS TGNIGGVDPS ITPQVPPQGQ 180 WMQYPQPQFA HPQQNIMGIY MPAQTMPQPL QMGAGSMMDL PYPDNQLALP SPLMGTLSDS 240 QTSGRKRGIH EEVVDRSVER RQKRMIKNRE SAARSRARKQ AYTSELENKV SRLEEENERL 300 RKRK

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010031349.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_010031350.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-80	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A059A9T9	0.0	A0A059A9T9_EUCGR; Uncharacterized protein
STRING	XP_010031349.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	7e-74	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]