PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC037361.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 117aa    MW: 13124.1 Da    PI: 4.5458
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC037361.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.63.3e-0853108149
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpk 49 
                   lppG++F+Ptd e++ e+L++k+ g+       +  +++i++++    i+ ++P++Lp 
  EcC037361.10  53 LPPGVKFDPTDLEIL-EHLEAKIIGDVrkihflI--DQFIPTLEgddgICCTHPERLPG 108
                   79************9.99****999885554321..233444423345*********93 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-941110IPR003441NAC domain
PROSITE profilePS5100510.9953117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MMWQKEDARA IIPSTYNPRD DDNSLLPTIT CPSCGHSVPM FYQRGIVHAL VGLPPGVKFD  60
PTDLEILEHL EAKIIGDVRK IHFLIDQFIP TLEGDDGICC THPERLPGNS EIVLLFE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that plays a regulatory role in the development of secondary cell wall fibers. Is a direct target of SND1. {ECO:0000269|PubMed:18952777}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010054344.13e-75PREDICTED: NAC domain-containing protein 73
SwissprotF4HY615e-28NAC10_ARATH; NAC domain-containing protein 10
TrEMBLA0A059CCV57e-74A0A059CCV5_EUCGR; Uncharacterized protein
STRINGXP_010054344.11e-74(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2108355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.12e-30NAC domain containing protein 10