PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC037933.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 53aa    MW: 5305.81 Da    PI: 7.5451
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC037933.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.62.8e-132953125
       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                  kprlrWt +LHerFv+av++LGG++
  EcC037933.50 29 KPRLRWTADLHERFVDAVTRLGGPD 53
                  79*********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-112553IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-82953IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009751Biological Processresponse to salicylic acid
GO:0055114Biological Processoxidation-reduction process
GO:1900056Biological Processnegative regulation of leaf senescence
GO:1900150Biological Processregulation of defense response to fungus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0010008Cellular Componentendosome membrane
GO:0003677Molecular FunctionDNA binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0016758Molecular Functiontransferase activity, transferring hexosyl groups
GO:0070273Molecular Functionphosphatidylinositol-4-phosphate binding
Sequence ? help Back to Top
Protein Sequence    Length: 53 aa     Download sequence    Send to blast
MYGGSGSGSG SESGGGGGGG GVVMTRDPKP RLRWTADLHE RFVDAVTRLG GPD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016571644.12e-17PREDICTED: myb family transcription factor APL isoform X1
RefseqXP_016571647.12e-17PREDICTED: myb family transcription factor APL isoform X2
SwissprotC0SVS41e-13PHLB_ARATH; Myb family transcription factor PHL11
TrEMBLA0A2G3AFT22e-16A0A2G3AFT2_CAPAN; Myb family transcription factor APL
TrEMBLA0A2G3DCU02e-16A0A2G3DCU0_CAPCH; Myb family transcription factor APL (Fragment)
STRINGSolyc08g076010.2.13e-16(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.13e-16G2-like family protein
Publications ? help Back to Top
  1. Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP
    Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation.
    New Phytol., 2016. 211(3): p. 912-25
    [PMID:27125220]