PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC038389.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 94aa    MW: 10538.1 Da    PI: 10.2212
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC038389.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like57.23.8e-184294151
       G2-like  1 kprlrWtpeLHerFveaveqLGGs..ekAtPktilelmkvkgLtlehvkSHLQ 51
                  k r+rWt+ LH++F e v++LGG+    A Pk il+lm+vkg+ + h+kSH Q
  EcC038389.10 42 KRRIRWTQLLHNQFHEWVNRLGGAgsTGAKPKLILKLMDVKGVKIFHIKSHVQ 94
                  68********************8622679**********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.0E-174094IPR009057Homeodomain-like
SuperFamilySSF466891.06E-94094IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-114294IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
SRSVNCESLV YDHSEDLQCL APQSHDDPRG NSILPAAAIS SKRRIRWTQL LHNQFHEWVN  60
RLGGAGSTGA KPKLILKLMD VKGVKIFHIK SHVQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019187721.11e-18PREDICTED: uncharacterized protein LOC109182119
SwissprotQ0WVU32e-14PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A061F4K81e-16A0A061F4K8_THECC; Myb-like HTH transcriptional regulator family protein, putative isoform 1
STRINGEOY094692e-17(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.25e-17G2-like family protein