PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC039152.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 215aa    MW: 23173.4 Da    PI: 4.031
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC039152.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.63.1e-09136178446
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                   +k++rr  +N+ AA rsR+RK+ +++eLe k+k +e+e ++L 
  EcC039152.10 136 SKKQRRQLRNKDAAARSRERKRSYVKELEMKSKYMEGECRRLG 178
                   79**********************************9988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-11130194No hitNo description
SMARTSM003382.2E-5133197IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.841135192IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7137192IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.55E-9137193No hitNo description
CDDcd147041.07E-14138189No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MENPDILGDD LALEFDFQSL FDELSPDAAG LLDASDVDAS SPGSLSSWIG EIEGMLMKDD  60
EEAVAVEPSQ EVFDRFFAGL LVDSPEGGPA EATDGASDKE SNSSGGGGGG GGERDEKLVV  120
GDNELSEDAD DDDPVSKKQR RQLRNKDAAA RSRERKRSYV KELEMKSKYM EGECRRLGRL  180
LQCFVAENQA LRLNLENGGA YGATMAKQES AVLLL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063178.11e-138PREDICTED: bZIP transcription factor 60
TrEMBLA0A059BW841e-136A0A059BW84_EUCGR; Uncharacterized protein
STRINGXP_010063178.11e-137(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46342848
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.14e-26basic region/leucine zipper motif 60