PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC039291.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 151aa    MW: 17376 Da    PI: 10.5013
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC039291.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.24.6e-1140135284
                   EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE CS
            B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFkl 84 
                   +k lt+sd +  +rl + ++ +++h           ++++ ++ +++++d +   + ++ + ++ +sg+yvl++GW keFvk  gL +gD v ++ 
  EcC039291.20  40 KKRLTQSDLGHMSRLLIGRDSVKSHflrrmneetvrQIESSKGADVIVRDMDTcSEHRLVFMFWASSGSYVLKGGWiKEFVKRRGLAVGDEVGIYW 135
                   5889*********************99988887777555668889999996666778888888*************999***********887774 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.33E-1338143IPR015300DNA-binding pseudobarrel domain
CDDcd100176.06E-1639147No hitNo description
Gene3DG3DSA:2.40.330.106.5E-1440146IPR015300DNA-binding pseudobarrel domain
PfamPF023625.9E-841134IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MSFLSAQSEE GSRQRGHRYF ICRSGGGWRA LPPRAPYKIK KRLTQSDLGH MSRLLIGRDS  60
VKSHFLRRMN EETVRQIESS KGADVIVRDM DTCSEHRLVF MFWASSGSYV LKGGWIKEFV  120
KRRGLAVGDE VGIYWEPIAS EFHFSLLHKV N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058716.18e-77PREDICTED: uncharacterized protein LOC104446575
TrEMBLA0A059C5988e-75A0A059C598_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010058716.13e-76(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.11e-22B3 family protein