PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC039765.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 111aa    MW: 13317.3 Da    PI: 8.6899
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC039765.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.92.6e-2514106396
           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                   pGfrFhP+ +el+  yLk+k+ g++    +vi+e++++k++Pw++      k +++e yfF+  ++ky++g+r  r+tk+gyWk+t + +e++ k+
  EcC039765.30  14 PGFRFHPHTDELLLGYLKAKILGQPD---DVIPEINLLKHKPWEIYFmfGDKFGDEEHYFFCWLKHKYPSGDRCDRTTKDGYWKQTRRGREIMGKR 106
                   9************************5...55**************842333348899***********************************9864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-2610105IPR003441NAC domain
PROSITE profilePS5100525.77212111IPR003441NAC domain
PfamPF023652.0E-1114100IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008234Molecular Functioncysteine-type peptidase activity
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MQNPISEAMR SPRPGFRFHP HTDELLLGYL KAKILGQPDD VIPEINLLKH KPWEIYFMFG  60
DKFGDEEHYF FCWLKHKYPS GDRCDRTTKD GYWKQTRRGR EIMGKRTDEL I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-15696999Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065025.13e-29PREDICTED: protein NTM1-like 9
TrEMBLA0A059DBY67e-28A0A059DBY6_EUCGR; Uncharacterized protein
STRINGXP_010030908.12e-28(Eucalyptus grandis)
STRINGXP_010065025.11e-28(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.19e-24NAC domain containing protein 52