PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC040536.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 232aa    MW: 25553.6 Da    PI: 9.8274
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC040536.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.53.3e-1466119558
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                   kr rr+ +NRe+Ar+sR+RK+a ++eLe  ++ L +e ++L k+l    +++  
  EcC040536.50  66 KRLRRMVSNRESARKSRKRKQAHLAELEIQADRLRGESSTLFKQLLDAAQHYRH 119
                   99****************************************999888877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-1662126IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-963114No hitNo description
PROSITE profilePS5021710.16264110IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-1066111No hitNo description
PfamPF001707.6E-1166111IPR004827Basic-leucine zipper domain
CDDcd147021.23E-1867118No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005509Molecular Functioncalcium ion binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MWTIRCIIQC KLVSVGSSTS LANKPKYRDI QAREATSGSS RQHSDEDDAA TVADPSKQSR  60
YPTDPKRLRR MVSNRESARK SRKRKQAHLA ELEIQADRLR GESSTLFKQL LDAAQHYRHA  120
DTNNRVLKSD VEALRAKVKL AEDMVARGPF PCSLNHVLQT LNHQHSIGTR GLSAVANVSP  180
TITVHGDNDS STGLTVPMPN SCLGVENSNP NNSDFTNGVI HDPVSFVSGI WS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17885RKSRKRKQ
28085SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010049789.11e-148PREDICTED: basic leucine zipper 9
SwissprotQ9FUD33e-56BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A059CWK31e-146A0A059CWK3_EUCGR; Uncharacterized protein
STRINGXP_010049788.11e-147(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-58basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]