PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC041307.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 176aa    MW: 19455.9 Da    PI: 5.2425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC041307.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.2e-132976355
           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  y+G+   ++  +Wv+eIr+p     + +r++lg++ t+e+A +a++ a+++l+g
  EcC041307.10 29 YRGI--LSRGRKWVSEIREPH----KsTRIWLGTYPTPEMAVAAYDVAALALKG 76
                  7777..344567*******62....35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.7671884IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-232885IPR001471AP2/ERF domain
SMARTSM003809.3E-202890IPR001471AP2/ERF domain
CDDcd000181.02E-222986No hitNo description
SuperFamilySSF541711.83E-162986IPR016177DNA-binding domain
PfamPF008471.7E-62976IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
TTMDQHSLPA DASRSPACHP PVSRRHPEYR GILSRGRKWV SEIREPHKST RIWLGTYPTP  60
EMAVAAYDVA ALALKGPGAL LNFPSSVLTY PIPPSTSPSD IRATASRAAT ARLLRWDLGI  120
DSNEHTATSG QEFIDEDAIL NMPNLLADMV EGMLLSPPRP EESQEYYDAE GLWNYL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038425.11e-100PREDICTED: ethylene-responsive transcription factor ERF027
SwissprotQ9SJR02e-42ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A058ZX412e-91A0A058ZX41_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010038425.11e-100(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.18e-33ERF family protein