PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC041360.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 37aa    MW: 4127.72 Da    PI: 9.3752
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC041360.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY438.7e-143362558
                  EEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
          WRKY 25 YrCtsagCpvkkkversaedpkvveitYegeHnh 58
                  Y Ct++gC+vkk+v+r ++d+ vv++tY+g+Hn 
  EcC041360.10  3 YCCTHSGCNVKKQVQRLTKDEGVVVTTYKGTHNT 36
                  99******************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081112.61137IPR003657WRKY domain
PfamPF031069.6E-10235IPR003657WRKY domain
SuperFamilySSF1182909.55E-11336IPR003657WRKY domain
SMARTSM007740.0038337IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-11336IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 37 aa     Download sequence    Send to blast
KLYCCTHSGC NVKKQVQRLT KDEGVVVTTY KGTHNTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.11e-12WRKY DNA-binding protein 24