PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC041408.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 158aa    MW: 18121 Da    PI: 4.3666
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC041408.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.41.6e-09139158221
                   --SS-EEEEEEE--TT-SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefp 21 
                   +D ++WrKYGqK++kgs++p
  EcC041408.10 139 SDMWAWRKYGQKPIKGSPHP 158
                   79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-9124158IPR003657WRKY domain
PROSITE profilePS5081112.955133158IPR003657WRKY domain
SuperFamilySSF1182901.26E-6136158IPR003657WRKY domain
PfamPF031064.5E-5140158IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MNSVRVDDWD LQAVVRGCGV GESSYDIMDW MSWQSDADLR QEEILFGGFS DFAETSALLD  60
DLEQLYKPFY PEPEAVRDVG LISEEVIEEA ENKLKEEEPL TDASTTSQAV HYEETKQRRR  120
KNQQKREVHH VTAADGVSSD MWAWRKYGQK PIKGSPHP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053209.11e-113PREDICTED: WRKY transcription factor 22
TrEMBLA0A059CGI44e-90A0A059CGI4_EUCGR; Uncharacterized protein
STRINGXP_010053209.11e-113(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-14WRKY family protein