PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC043814.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 150aa    MW: 16921.7 Da    PI: 9.4628
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC043814.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP56.79.6e-181260856
           TCP  8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqak 56
                   +++ Tk+  R+  +R+++ caar+F L++eLG+   ++ti+WLl+ a 
  EcC043814.30 12 AKDRRTKGRARGCWIRIPMACAARVFRLTRELGHRNSGETIQWLLNRAG 60
                  69********************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.9E-141260IPR005333Transcription factor, TCP
PROSITE profilePS5136911.2451266IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006412Biological Processtranslation
GO:0005840Cellular Componentribosome
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005524Molecular FunctionATP binding
GO:0016887Molecular FunctionATPase activity
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MNFNGMLTHA VAKDRRTKGR ARGCWIRIPM ACAARVFRLT RELGHRNSGE TIQWLLNRAG  60
TEPSLSLAID SDGGTVANXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAQTMSAQ  120
SYYDAICGMH FCWPVFSDAD VARLKPIVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.13e-17TCP family protein