PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC044606.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 162aa    MW: 17776.9 Da    PI: 10.7202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC044606.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-1856105255
           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  EcC044606.10  56 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 105
                   59*******.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.08956113IPR001471AP2/ERF domain
SMARTSM003808.6E-3456119IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-3056112IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2256113IPR016177DNA-binding domain
CDDcd000182.49E-2856112No hitNo description
PfamPF008472.3E-1156105IPR001471AP2/ERF domain
PRINTSPR003675.7E-105768IPR001471AP2/ERF domain
PRINTSPR003675.7E-107995IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MDQEHTQFNT LAPNPPHGSL HKKPPTPAPT TALANSGKRA LRDGGGGGGG SGVTMRYRGV  60
RRRPWGRYAA EIRDPQSKER RWLGTFDTAE EAACAYDCAA RAMRGVKART NFVYPTNPPP  120
LSDHHHHHHH HFLHNPVPFP PKPYSRDLAG ITTRGTVLAA SP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-2049117476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026637.13e-97PREDICTED: ethylene-responsive transcription factor ESR2
TrEMBLA0A059B0H91e-68A0A059B0H9_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010026637.11e-96(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-14DORNROSCHEN-like