PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC045266.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 218aa    MW: 25604.7 Da    PI: 11.3244
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC045266.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.6e-1161110255
           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    y+ Vr +  +grWv+e+r+p++   + r++l +f   ++A +a++ a+++l+g
  EcC045266.40  61 IYRVVRLCY-SGRWVCEVREPKK---KSRIWLSTFPAVDMAVRAHDVAALALRG 110
                   599999997.8*********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.97E-1960119No hitNo description
SuperFamilySSF541714.05E-1361119IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.8E-2161119IPR001471AP2/ERF domain
SMARTSM003805.3E-1361124IPR001471AP2/ERF domain
PROSITE profilePS5103216.77961118IPR001471AP2/ERF domain
PfamPF008474.2E-662110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010183Biological Processpollen tube guidance
GO:0015074Biological ProcessDNA integration
GO:0046777Biological Processprotein autophosphorylation
GO:0090406Cellular Componentpollen tube
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
VSYKHSPHRP HYPLHSYSTA IALFQCGRPP MNFSDDKVCL ASHHLKKRAR RKKFRQTRHP  60
IYRVVRLCYS GRWVCEVREP KKKSRIWLST FPAVDMAVRA HDVAALALRG QSTCLNFADF  120
TWWLPMLALA DAKTHRRRWP MPRRHSSRWS PRTRCRGTRR SRILKRECCT TRTSSGCQDC  180
SQIWRRGCSC LPRNAVEIYM AEGTMGTWTH TRYYGAIP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1J0MRN32e-79A0A1J0MRN3_EUCGU; C repeat-binding factor F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-39C-repeat-binding factor 4