PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC045318.40

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

VOZ

Protein Properties

Length: 471aa MW: 52439.8 Da PI: 5.8607

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC045318.40	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	447.7	1.3e-137	195	411	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 pppsaflgpkcalwdc+rpaqg ew+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+elfd EcC045318.40 195 PPPSAFLGPKCALWDCPRPAQGLEWCQDYCSSFHAALALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFD 291 89********************************************************************************************* PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekk 194 ls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kk EcC045318.40 292 LSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKK 388 ********************************************************************************************* PP VOZ 195 sakgkvskdsladlqkklgrlta 217 ++kg+v++dsladlqk++grlta EcC045318.40 389 NPKGRVANDSLADLQKQMGRLTA 411 *******************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence Send to blast
MGKGSKNYCK SASHKLFKDK AKNRVDDLQG MFVDLQYARK ESRNVDVVVL EEQVHQMLRE 60 WKAELNEPSP ASSLHKLLQL CEEEDDATSA LTPPKAEPND QNLNIGDGTN LAEGLNSKPR 120 PQKRCFPSAD QCKDSHVAIG AAAIDTVDGI NSLEQLQFGL NQGFNQSYYD NYNSTGFGGE 180 DTMPHVTNCL PSICPPPSAF LGPKCALWDC PRPAQGLEWC QDYCSSFHAA LALNEGPPGM 240 SPVLRPGGIG LKDGLLFAAL SAKAQGKDVG IPECEGAATA KSPWNAPELF DLSVLEGETI 300 REWLFFDKPR RAFESGNRKQ RSLPDYSGRG WHESRKQVMN EFGGLKRSYY MDPQPLNHFE 360 WHLYEYEINK YDACALYRLE LKLVDGKKNP KGRVANDSLA DLQKQMGRLT AEFPPDSKRS 420 VKGRTKVNSK DSVGYMYSDQ NHGAAANEIV DYGLVSPYDY LVENKGEYYV T

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence Send to blast

MGKGSKNYCK SASHKLFKDK AKNRVDDLQG MFVDLQYARK ESRNVDVVVL EEQVHQMLRE  60
WKAELNEPSP ASSLHKLLQL CEEEDDATSA LTPPKAEPND QNLNIGDGTN LAEGLNSKPR  120
PQKRCFPSAD QCKDSHVAIG AAAIDTVDGI NSLEQLQFGL NQGFNQSYYD NYNSTGFGGE  180
DTMPHVTNCL PSICPPPSAF LGPKCALWDC PRPAQGLEWC QDYCSSFHAA LALNEGPPGM  240
SPVLRPGGIG LKDGLLFAAL SAKAQGKDVG IPECEGAATA KSPWNAPELF DLSVLEGETI  300
REWLFFDKPR RAFESGNRKQ RSLPDYSGRG WHESRKQVMN EFGGLKRSYY MDPQPLNHFE  360
WHLYEYEINK YDACALYRLE LKLVDGKKNP KGRVANDSLA DLQKQMGRLT AEFPPDSKRS  420
VKGRTKVNSK DSVGYMYSDQ NHGAAANEIV DYGLVSPYDY LVENKGEYYV T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010057344.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_010057345.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_010057346.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A059C8K5	0.0	A0A059C8K5_EUCGR; Uncharacterized protein
STRING	XP_010057344.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6667	27	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]