PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC046522.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 171aa    MW: 18981.3 Da    PI: 10.8498
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC046522.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP103.43.9e-32110170262
           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikel 62 
                   +gkkdrhski T +g+RdRR+Rls+++ ++fF Lqd+LGfdk+sktieWLl ++  +ike 
  EcC046522.10 110 TGKKDRHSKIRTVQGLRDRRIRLSVQVSRKFFGLQDMLGFDKASKTIEWLLSKSRNSIKEV 170
                   79********************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.4E-32110170IPR005333Transcription factor, TCP
PROSITE profilePS5136933.048112170IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MFSASGDGHH SPFLPTEEAL AIAESSQNQE AGGRPSPFTH FPSVPNHIDG VLSSLHHYFS  60
QQHVAPHDAD FTSFAASDQT TPPKSRVDAN GVRVADPAKN KKALPRKRNT GKKDRHSKIR  120
TVQGLRDRRI RLSVQVSRKF FGLQDMLGFD KASKTIEWLL SKSRNSIKEV V
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068762.11e-122PREDICTED: transcription factor TCP12
TrEMBLA0A059BGH19e-59A0A059BGH1_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010068762.11e-122(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.29e-28TCP family protein