PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC046950.50

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

NAC

Protein Properties

Length: 82aa MW: 10175 Da PI: 9.5831

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC046950.50	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.5	1e-09	2	45	11	50
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLp.k....k 50 deelv +yLk+kve++ l + i +vd yk +PwdLp k EcC046950.50 2 DEELVAFYLKRKVEKQLLAV-VLIWHVDTYKDDPWDLPsKfvfaF 45 9**************999.67************94333321 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	10.036	1	82	IPR003441	NAC domain
SuperFamily	SSF101941	2.09E-9	2	57	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 82 aa Download sequence Send to blast
MDEELVAFYL KRKVEKQLLA VVLIWHVDTY KDDPWDLPSK FVFAFIRFLL YKFYVFHTER 60 IRKIISLIVF VKYYNDVYHR PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	9e-12	NAC family protein