PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC047289.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 181aa    MW: 20750.1 Da    PI: 5.692
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC047289.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.91.2e-19121181259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    Dgy+WrKY q  + +sefpr+YY C+++   gC+++k+v++ ++dp +  ++ +g+H+++
  EcC047289.10 121 YDGYSWRKYAQEAILKSEFPRNYYGCSHKfdqGCQATKQVQKIKDDPPIYRTICQGHHTCK 181
                   5***************************9999**************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-20114181IPR003657WRKY domain
SuperFamilySSF1182901.19E-19115181IPR003657WRKY domain
PROSITE profilePS5081117.5115181IPR003657WRKY domain
SMARTSM007743.0E-21120181IPR003657WRKY domain
PfamPF031062.5E-20122181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015074Biological ProcessDNA integration
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MERFAWPQNL STSRKRMIEE ILRAQKSVTT LLDLFSAQSQ AGNNTQLPLS AEDLLEDLKE  60
SFANSLSLLG MAESDEVSQV PTKSCVRFED SDEESTSTPV PRQLRGTSNT WTRLDDHEFV  120
YDGYSWRKYA QEAILKSEFP RNYYGCSHKF DQGCQATKQV QKIKDDPPIY RTICQGHHTC  180
K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-151221811069OsWRKY45
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018727312.11e-132PREDICTED: probable WRKY transcription factor 62 isoform X3
STRINGXP_010043355.11e-128(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.17e-27WRKY DNA-binding protein 38