PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC047555.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 255aa    MW: 28684.8 Da    PI: 4.365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC047555.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.23.6e-11108932127
           NAM  32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                   +vi++v+ +++ P++Lp      e+ wyf  + +         n+ ++ g+W   g+ +e++  +   +g  +t  fy+gr p+ ektdW m ey 
  EcC047555.10  10 NVITDVNPFNCLPKTLP------ENMWYFTNSVE---------NKGAEGGFWMPRGEPREIFG-DAFIKGWEETHEFYEGRGPQVEKTDWSMLEYY 89 
                   67999999999999999......45677755544.........445689**************.9999**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.1711113IPR003441NAC domain
SuperFamilySSF1019412.35E-197113IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MARADFFPAN VITDVNPFNC LPKTLPENMW YFTNSVENKG AEGGFWMPRG EPREIFGDAF  60
IKGWEETHEF YEGRGPQVEK TDWSMLEYYR TSKVSGEALS AKDAKSLCKV FRSSSSPLSD  120
SKMLQNAAGT EFRRENYLYF LLPDNFNIPT KQCVTNQMQV NTTSRNIMRP ASSFSPSHPI  180
ASLPELDHID SGDYLELLDL DIPQSSSSRS DNSSCMTMSS DEIFDYLVAM LDSEAESGDH  240
VEHRDAGCNL NVSDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.11e-158PREDICTED: uncharacterized protein LOC104448728
TrEMBLA0A059BP341e-156A0A059BP34_EUCGR; Uncharacterized protein
STRINGXP_010060914.11e-165(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.19e-13NAC domain containing protein 6