PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048062.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 346aa    MW: 40159.2 Da    PI: 4.274
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048062.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.31.3e-18653149
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                  lppGfrFhPtdeelv +yLk+k+eg+++el evi+ vd+yk++Pw+Lp 
  EcC048062.30  6 LPPGFRFHPTDEELVGYYLKRKIEGQEFEL-EVIPVVDLYKFDPWELPX 53
                  79****************************.99**************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-19354IPR003441NAC domain
PROSITE profilePS5100517.0046268IPR003441NAC domain
PfamPF023651.3E-8748IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015743Biological Processmalate transport
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MASASLPPGF RFHPTDEELV GYYLKRKIEG QEFELEVIPV VDLYKFDPWE LPXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXMSNST YSQGSYLCNE IHYPSHMPPQ HEVTQMADLN PYLTETNPAS  240
CWVSPDMILD SSKDYSQGQY TVPHNFQHQQ HDFPSPMTSW QPCDHKEISP SSSYSNLAGE  300
VELPDELNRF SCVSPYSGHG DYMEYYGDIP YGGYDNASSL GYPKPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-142521161Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055345.11e-104PREDICTED: NAC domain-containing protein 86
TrEMBLA0A059C0B61e-103A0A059C0B6_EUCGR; Uncharacterized protein
STRINGXP_010055345.11e-103(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-25NAC domain containing protein 71