PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048177.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 153aa    MW: 16704.9 Da    PI: 10.4707
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048177.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1658105152
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                   s ykGVr+++ +g+++AeIrdp    +r  r++lg+f taeeAa a+ + +++
  EcC048177.10  58 SEYKGVRRRP-WGKYAAEIRDP----IRkVRVWLGTFNTAEEAALAYQRKKLE 105
                   569*******.**********7....246******************887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.73E-2358106No hitNo description
SuperFamilySSF541713.47E-1758106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.8E-2359106IPR001471AP2/ERF domain
PROSITE profilePS5103219.24359118IPR001471AP2/ERF domain
PfamPF008475.6E-1159106IPR001471AP2/ERF domain
SMARTSM003802.3E-2059113IPR001471AP2/ERF domain
PRINTSPR003679.1E-116071IPR001471AP2/ERF domain
PRINTSPR003679.1E-118298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
QNKQVIKEIV IPVNSHKSSG EGCSRANNGS QKYISISKKF GCAASARQEK NNVPPPPSEY  60
KGVRRRPWGK YAAEIRDPIR KVRVWLGTFN TAEEAALAYQ RKKLEFDALS VPGKNNTTCQ  120
HLTGPAFLVP SPSSVLDVPS SSSSGNRHEV SAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-1660101648ATERF1
3gcc_A6e-1660101648ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031938.11e-106PREDICTED: ethylene-responsive transcription factor ERF119
RefseqXP_010031952.11e-106PREDICTED: ethylene-responsive transcription factor ERF119
RefseqXP_018723292.11e-106PREDICTED: ethylene-responsive transcription factor ERF119
RefseqXP_018723293.11e-106PREDICTED: ethylene-responsive transcription factor ERF119
SwissprotP930072e-19EF112_ARATH; Ethylene-responsive transcription factor ERF112
TrEMBLA0A059CZR51e-105A0A059CZR5_EUCGR; Uncharacterized protein
STRINGXP_010031938.11e-106(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-21ERF family protein