PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048303.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Nin-like
Protein Properties Length: 90aa    MW: 10506.5 Da    PI: 11.1305
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048303.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK63.53.6e-20651449
        RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                  +++l d+  yF+lpi++A   L +c+T++K+iCR+ G+ RWP+Rk+
  EcC048303.10  6 KMTLADVGGYFHLPIEKAFERLHLCPTIVKKICRKGGVGRWPYRKV 51
                  7999*****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151913.265175IPR003035RWP-RK domain
PfamPF020422.6E-17651IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
RERAGKMTLA DVGGYFHLPI EKAFERLHLC PTIVKKICRK GGVGRWPYRK VTLPFVSLSS  60
RIEIGLSKIF HFSQILVFCR FNVLRERSWN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018718903.12e-29PREDICTED: protein RKD5 isoform X3
RefseqXP_018718904.12e-29PREDICTED: protein RKD5 isoform X3
TrEMBLA0A058ZV017e-29A0A058ZV01_EUCGR; Uncharacterized protein
STRINGXP_010050417.13e-29(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-09RWP-RK domain-containing protein