PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048782.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 182aa    MW: 19881.1 Da    PI: 5.7963
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048782.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.4e-133088563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                  ++ +r+++NRe+ArrsR RK+  ++ L   v +L + N++L+++++  ++++ +l++e+
  EcC048782.10 30 RKRKRMISNRESARRSRMRKQRHLDDLMLVVVQLRKDNQQLRDNVNVVSQHYMTLETEN 88
                  6789************************************************9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-111984No hitNo description
SMARTSM003389.8E-182690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5762891IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.97E-113084No hitNo description
PfamPF001703.2E-103088IPR004827Basic-leucine zipper domain
CDDcd147021.65E-183182No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MASSSGTSSG STLIQNSGSE ESLQALMDQR KRKRMISNRE SARRSRMRKQ RHLDDLMLVV  60
VQLRKDNQQL RDNVNVVSQH YMTLETENSI LRVQMNELTN RLESLKDILG ILDAGDGGRP  120
GNGGGSGYNG GGGSGNGGFG SPEEIVGGGD WTDQPIDYFF NPMSCAYAVN QPILASADMF  180
QY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
2116124GGRPGNGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028614.13e-95PREDICTED: bZIP transcription factor 11-like
TrEMBLA0A059ANG29e-77A0A059ANG2_EUCGR; Uncharacterized protein
STRINGXP_010028614.11e-94(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-32basic leucine-zipper 44