PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC049036.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 109aa    MW: 12365.6 Da    PI: 4.217
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC049036.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.51.2e-1458104248
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 
                   p GfrF Ptde+l+ +yLk+k++g++++l++++++vd+y+++P++L 
  EcC049036.10  58 PLGFRFAPTDEDLILYYLKPKIAGDPIPLADFFADVDLYQFDPRELI 104
                   89*******************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-1554107IPR003441NAC domain
PROSITE profilePS5100517.56257109IPR003441NAC domain
PfamPF023657.5E-758101IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MENNDHSHSR HCDDQPKGTH VNGQRNAGVD QCMTSSSQEL VAAPPRQSSE DDFQLEFPLG  60
FRFAPTDEDL ILYYLKPKIA GDPIPLADFF ADVDLYQFDP RELIGTYVY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720398.13e-67PREDICTED: protein ATAF2-like
TrEMBLA0A059D8U71e-39A0A059D8U7_EUCGR; Uncharacterized protein
STRINGXP_010046701.12e-37(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79671340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.16e-13NAC domain containing protein 47