PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050668.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 144aa    MW: 16626.9 Da    PI: 9.3663
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050668.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM706.3e-22151394127
           NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                    f F+Ptd+el ++yL +++++++l+  +vi+++d+y   ePw++  k   ++ + y F+  +kk  + +r  r++ sg Wk   +  + ++ +g +
  EcC050668.20  15 VFCFQPTDQELFSDYLMRRLNKEPLPDPNVIRDCDVYGGgEPWKIFDK--DRSGKFYVFTVLKKK--NRSRVDRTAGSGSWKGEQS-SDFKDLQGDV 106
                   589**********************9999********866*****622..233466777777666..578************7765.555555899* PP

           NAM 100 vglkktLvfy.....kgrapkgektdWvmheyr 127
                   +g kk ++f      +++a k+e+ +W+m ey+
  EcC050668.20 107 IGYKKLFTFKpkagsSAKADKAENGHWIMYEYS 139
                   **********98776679999999********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-2010139IPR003441NAC domain
PROSITE profilePS5100522.33312144IPR003441NAC domain
PfamPF023651.8E-1514139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
VIPFEFITMA TRHPVFCFQP TDQELFSDYL MRRLNKEPLP DPNVIRDCDV YGGGEPWKIF  60
DKDRSGKFYV FTVLKKKNRS RVDRTAGSGS WKGEQSSDFK DLQGDVIGYK KLFTFKPKAG  120
SSAKADKAEN GHWIMYEYSK HPCN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055621.17e-94PREDICTED: NAC domain-containing protein 68-like isoform X2
RefseqXP_018729435.17e-94PREDICTED: NAC domain-containing protein 68-like isoform X1
STRINGXP_010055621.13e-93(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.19e-14NAC domain containing protein 32