PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050878.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 147aa    MW: 17274.8 Da    PI: 11.6262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050878.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.82.4e-073668641
           AP2  6 VrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaee 41
                  +r+++ +g+++AeIrdp  ng  +r +l +f taee
  EcC050878.10 36 IRRRP-WGKFAAEIRDPLRNG--TRPWLRTFETAEE 68
                  68999.**********86676..**********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.6813268IPR001471AP2/ERF domain
SMARTSM003800.00143275IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-133268IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-83368IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MEGSSSRGNQ NSENKDEMGK KRGSRLRCDQ NRYCAIRRRP WGKFAAEIRD PLRNGTRPWL  60
RTFETAEEPC LRPGCLCLSR PFGHPQLPQR ATIFTLRMIK MSPATTVLSW HPIRCHHRHS  120
HQQVRHHPLC QLYRAFQRHD RVRVSGP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018718621.13e-41PREDICTED: ethylene-responsive transcription factor ERF098-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3458322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-15ERF family protein