PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051178.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 182aa    MW: 20941.4 Da    PI: 8.0603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051178.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.31.2e-061451963
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1 19 rsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                  rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l++e+
  EcC051178.10  1 RSKERKMRYIAELERKVQTLQTEATTLSAQLTLLQRDTNGLTAEN 45
                  7889****************************9999888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-6141No hitNo description
CDDcd147036.48E-14137No hitNo description
SuperFamilySSF579596.94E-5141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009058Biological Processbiosynthetic process
GO:0010584Biological Processpollen exine formation
GO:0016844Molecular Functionstrictosidine synthase activity
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
RSKERKMRYI AELERKVQTL QTEATTLSAQ LTLLQRDTNG LTAENSELKL RLQTMEQQVH  60
LQDALNEALK EEIQHLKVLT GQSMPNGGPM MNYPSFGSGQ QFYPNNHAMH TLLAAQQFQQ  120
LQIQSQKQQH QFQQHQLHHQ LQQQQLQHEQ HQQAGDLKFR APIPSPNQKD GNAAESNSSK  180
ME
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046685.11e-125PREDICTED: probable transcription factor PosF21 isoform X2
SwissprotQ040885e-60POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A059DB531e-123A0A059DB53_EUCGR; Uncharacterized protein
STRINGXP_010046629.18e-93(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.13e-46bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]