PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051202.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 45aa    MW: 5274.99 Da    PI: 10.4774
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051202.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.4e-08528124
                     TSSS-HHHHHHHHHHHHHTTTT-H CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtW 24
                     +g+WT+eEd+ l+  v++ G g+W
     EcC051202.30  5 KGPWTPEEDQNLISTVQRNGHGNW 28
                     79********************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-8129IPR009057Homeodomain-like
PROSITE profilePS5129410.886145IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-10328IPR009057Homeodomain-like
PfamPF002495.3E-7528IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 45 aa     Download sequence    Send to blast
MGLKKGPWTP EEDQNLISTV QRNGHGNWWV KQATIKNTFL SPFYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-10myb domain protein 17