PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051212.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 202aa    MW: 23138.4 Da    PI: 4.753
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051212.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.21e-122011713128
           NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109
                   el  +++   ++++ +++ +vi++v+ +++ P++Lp      e+ wyf           + +nr ++ g+W   g+ +e++  +    g  +t  fy
  EcC051212.10  20 ELF-KFMFCMARADFFPA-NVITDVNPFNCLPETLP------ENTWYFTN---------SMENRGAEGGFWMPRGEPREIFG-DVFINGWEETHEFY 98 
                   555.55555666666677.89**************9......46788743.........356898899*************9.8999********** PP

           NAM 110 kgrapkgektdWvmheyrl 128
                   +gr pk ekt+W+m ey +
  EcC051212.10  99 EGRGPKVEKTNWLMLEYYM 117
                   *****************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.0358140IPR003441NAC domain
SuperFamilySSF1019412.35E-2125140IPR003441NAC domain
PfamPF023651.3E-532116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MCPPAVAPLF DIKNISSNEE LFKFMFCMAR ADFFPANVIT DVNPFNCLPE TLPENTWYFT  60
NSMENRGAEG GFWMPRGEPR EIFGDVFING WEETHEFYEG RGPKVEKTNW LMLEYYMTSK  120
VSGAALSARD AKSLCKVFRS GSLPLSNSEM LQNAAGTEFR RENYLYSLSP DNFNKPTKQC  180
VTNQMQVCLM DLFVVARFFL NS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.11e-135PREDICTED: uncharacterized protein LOC104448728
RefseqXP_018731916.11e-135PREDICTED: NAC domain-containing protein 79
TrEMBLA0A059BP341e-133A0A059BP34_EUCGR; Uncharacterized protein
STRINGXP_010060913.11e-134(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-16NAC domain containing protein 58