PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC051359.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

VOZ

Protein Properties

Length: 230aa MW: 25781.4 Da PI: 8.784

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC051359.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	377.3	4.5e-116	1	206	12	217
VOZ 12 alwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsllegetire 108 alwdc+rpaqgsew+ dycs++ha+lal eg+pg++pvlrp+gi+lkd+ l+++l+ak+qgk+vgipec+gaa +kspwna++lfdlsllege ire EcC051359.10 1 ALWDCQRPAQGSEWCLDYCSTMHADLALSEGSPGMNPVLRPGGIGLKDDRLLSSLMAKMQGKNVGIPECHGAAIEKSPWNASKLFDLSLLEGENIRE 97 8********************************************************************************************** PP VOZ 109 wlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsl 205 wlffdkprrafesgnrkqrsl dysgrgwhesrkq+mke+gg+krsyymdpqp++sfewhl+eye++++ ++aly+lelklv kks+kgk ++ds+ EcC051359.10 98 WLFFDKPRRAFESGNRKQRSLSDYSGRGWHESRKQLMKELGGHKRSYYMDPQPPGSFEWHLFEYEVTSSGSCALYKLELKLVSIKKSPKGKGMNDSV 194 ********************************************************************************************* PP VOZ 206 adlqkklgrlta 217 +dlqk++ rlta EcC051359.10 195 VDLQKQMRRLTA 206 ********97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006508	Biological Process	proteolysis
GO:0005739	Cellular Component	mitochondrion
GO:0003924	Molecular Function	GTPase activity
GO:0005525	Molecular Function	GTP binding
GO:0008234	Molecular Function	cysteine-type peptidase activity

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
ALWDCQRPAQ GSEWCLDYCS TMHADLALSE GSPGMNPVLR PGGIGLKDDR LLSSLMAKMQ 60 GKNVGIPECH GAAIEKSPWN ASKLFDLSLL EGENIREWLF FDKPRRAFES GNRKQRSLSD 120 YSGRGWHESR KQLMKELGGH KRSYYMDPQP PGSFEWHLFE YEVTSSGSCA LYKLELKLVS 180 IKKSPKGKGM NDSVVDLQKQ MRRLTADVSP DAKHPVKGGM KSDQKANSEC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010052424.1	1e-166	PREDICTED: transcription factor VOZ1 isoform X1
Refseq	XP_018731294.1	1e-166	PREDICTED: transcription factor VOZ1 isoform X1
Refseq	XP_018731297.1	1e-166	PREDICTED: transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	1e-108	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A059DH99	1e-165	A0A059DH99_EUCGR; Uncharacterized protein
STRING	XP_010052424.1	1e-165	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-110	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]