PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC052511.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bHLH

Protein Properties

Length: 44aa MW: 5104.89 Da PI: 12.3998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC052511.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.7	2.1e-08	12	37	5	30
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 + Er+RR++++ f++L +l+P++ EcC052511.10 12 RKTTERNRRNQMKALFSKLHSLVPPQ 37 5789********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.1E-6	6	41	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.848	7	44	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-6	9	37	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.6E-5	13	37	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 44 aa Download sequence Send to blast
MERKPGSSRP DRKTTERNRR NQMKALFSKL HSLVPPQSPR VSLS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010057406.1	2e-20	PREDICTED: uncharacterized protein LOC104445267
Refseq	XP_018728441.1	2e-20	PREDICTED: uncharacterized protein LOC104445267
TrEMBL	A0A059C876	4e-19	A0A059C876_EUCGR; Uncharacterized protein
STRING	XP_010057406.1	6e-20	(Eucalyptus grandis)