PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC052644.20

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

Dof

Protein Properties

Length: 241aa MW: 26097.2 Da PI: 9.7871

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC052644.20	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	15	75	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC st+tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s EcC052644.20 15 KDQALNCPRCTSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPS 75 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	11	67	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.0E-33	16	73	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.798	19	73	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	21	57	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0008408	Molecular Function	3'-5' exonuclease activity

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MEGSSRPALR SRPQKDQALN CPRCTSTHTK FCYYNNYSLS QPRYFCKTCR RYWTEGGSLR 60 NVPVGGGSRK NKRPSSSSPS TSSSSSKNKI IPNLTPPPPT ILHSDPQNPN NKPQEGQGFS 120 LPSYLPAQAY AALSHHLPNP SSSSSPMEFL KSGGSWPSGL SLSSLMAIPG SDTSACMYSA 180 SAGFPLQELK PNLQYFSLAG LEAGEFKQVP SRTAELEQMN RGQHGDPSTG YWSKLLGGGS 240 W

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010048893.1	1e-174	PREDICTED: dof zinc finger protein DOF1.8
TrEMBL	A0A059DEE3	1e-173	A0A059DEE3_EUCGR; Uncharacterized protein
STRING	XP_010048893.1	1e-173	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	4e-33	Dof family protein